Package: Ac3net 1.2.2

Ac3net: Inferring Directional Conservative Causal Core Gene Networks

Infers directional conservative causal core (gene) networks. It is an advanced version of the algorithm C3NET by providing directional network. Gokmen Altay (2018) <doi:10.1101/271031>, bioRxiv.

Authors:Gokmen Altay

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Ac3net.pdf |Ac3net.html✨
Ac3net/json (API)

# Install 'Ac3net' in R:
install.packages('Ac3net', repos = c('https://altayg.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • expdata - Real E.coli Gene Expression Dataset
  • truenet - The known intreactions of E.coli from RegulonDB database.
  • zeroindx - The indices to force to zero correlations.

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.08 score 12 scripts 317 downloads 9 exports 1 dependencies

Last updated 7 years agofrom:ef9d02af14. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 16 2024
R-4.5-winOKNov 16 2024
R-4.5-linuxOKNov 16 2024
R-4.4-winOKNov 16 2024
R-4.4-macOKNov 16 2024
R-4.3-winOKNov 16 2024
R-4.3-macOKNov 16 2024

Exports:Ac3netAc3net.commonlinksAc3net.cutoffAc3net.filtersamesAc3net.getDifferentLinksAc3net.getDirectedOrDualLinksAc3net.maxmimAc3net.MTCAc3net.performance

Dependencies:data.table